oh wow, congrats a1ex, you fixed it, now i will try with the parameter same levels, in a batch convertion of 100 files from 0 upwards, hopefully it wont crash and no flickering, if all good, ill be very happy, well done dude, few notes and suggestions:
may i ask, what was the issue, did the screen shot help figure it out?
few days ago before i knew the cause of flickering i used the script for running multiple instances of cr2hdr, i asume it wont work since the same levels needs to be used within the initial single process, right? if thats the case, how about instead of using "same levels", we assing a specific variable to run with a parameter that sets the exposure, so this way each instance using the script would process the same level, speeding up the processing for video sequences greatly (hopefully its not something i missed in the forum)
the above i believe is necessary for longer sequences with many frames, if i try to click and drag even a 100 files, it will give me an error saying file path too long
also, how about putting a list of versions of cr2hdr in the very first post, i found the actual list of versions, but its the code only not the exe file, and im no where near a coder so i wouldnt know what to do with the code, im sure it would benefit many people
maybe theres a way to put the latest file in the first post? i gotta be honest it took me a few days to figure out the flickering cause, at first i found its ACR, shadow and highlight changes, then cr2hdr, i processed some NON dual iso sequences and there was no flickering what so ever, (even with process 2012 in acr), so i dont think its ACR issue, so yeah, would be useful for many people i think if the latest file was in the first post
big respects for your work and the speed of your fixes, just making suggestions for problems ive encountered as a regular user that im sure many other users would experience (finding the right information. i.e latest cr2hdr file)

NOTE FOR THOSE WHO DO NOT KNOW ABOUT RUNNING PARAMETERS, make a shortcut of the "cr2hdr-20bit.exe" file, right click on shortcut > properties, in the target, copy and paste --same-levels at the end of the taget, if the target has spaces in the url, put " at the beginning of the url and at the end of it, for example:
"C:\camera raw dual iso converter\cr2hdr-20bit.exe" --same-levels
putting this info here to save time for people who dont know (like me)
also do you know anyway of evening out the flickering in the dngs after processing them with the old cr2hdr that didnt have the same levels parameters